Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796769.1_cds_XP_016451581.1_4527
CDS Infomation

[gene=LOC107776221] [db_xref=GeneID:107776221] [protein=probable indole-3-pyruvate monooxygenase YUCCA8] [protein_id=XP_016451581.1] [location=join(33165..33815,34110..34481,34818..35042)] [gbkey=CDS]
Sequence

ATGGTTAACTTCAATGATCAAGATTTCTTTTCTAGTAAATGTGTATGGGTAAATGGCCCT
GTTATTGTAGGTGCAGGTCCGTCAGGACTAGCTGTGGGTGCTTGTTTAAAAGAACAAGGA
ATTCCTTGTGTAATCTTGGAAAAATCTGATTGCATTGCATCATTATGGCAGAAAAAAACT
TATGATAGATTAAAACTACACCTCCCTAAACAATTCTGTCAATTACCCAAATTCCCATTT
CCACAACACTACCCTGAGTACCCCACAAAGAAACAATTCATTGAATATCTTGAATCATAT
GCTAGAAAATTTAACATTAATCCAAGATTCAACGAGTGTGTTAAATTTGCAAAATATGAT
GAATCTTGTAAATTGTGGAAGGTGAAAACTATTTCTCCAAATGGTTCAGAAGTTGAATAT
ATTTGCCAGTGGCTTGTTGTGGCTACAGGAGAAAATGCTGAGAAAGTTGTGCCTAATATT
GAAGGTTTAAAAGAATTTGGAGGTGAAGTGATTCATGCTTGTGATTATAAGTGTGGTGAG
AAGTTTTTTGGGAAAAAAGTTCTTGTTGTTGGATGTGGAAATTCTGGCATGGAAGTTTCT
CTTGATCTTTGTAACCACAATGCTCAACCATCAATAGTTTGTCGTAGCTCGGTTCATGTT
TTGCCAAGAGAAATCTTTGGGACATCAACATTTGAGTTAGCTATGTTTATGATGAAATGG
CTACCACTTTGGCTAGTTGACAAGATTATACTCATTTTGACATGGTTTATTCTTGGAAAT
ATTGAAAAATATGGACTAAAAAGGCCATCGATTGGTCCTTTGGAACTCAAGAACACACAA
GGGAAAACTCCTGTTTTGGACATTGGTGCATTGGAAAAAATTAGATCAAGAAAAATTAAT
GTTGTCCCTGGAATCAAGAAGTTTTCATGTGGCACTGTTGAACTTGTCAATGGTGAAAAA
CTTGAAATTGATTCTGTTGTTCTTGCAACTGGTTATTGCAGCAATGTCCCTTATTGGCTA
CAGGAAAGTGAATTTTTTTCCAATAATGGATTCCCAAAAGCACCATTTCCAAATAGTTGG
AAAGGAAAATCTGGGCTATATGCAGTTGGTTTCACAAGGAGAGGGCTAGCTGGTGCTTCT
GCTGATGCTATTAGAATTGCACAAGATATTGGCAAGGTTTACAAACAAGATCTTAAGCAA
ACAAAGCAAAAGTTTCCCACACATAGAGGATGCATATCTACCTCTTGA

Peptide Sequence

PEP ID

XP_016451581.1
PEP Infomation

PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA8 [Nicotiana tabacum]
Sequence

MVNFNDQDFFSSKCVWVNGPVIVGAGPSGLAVGACLKEQGIPCVILEKSDCIASLWQKKT
YDRLKLHLPKQFCQLPKFPFPQHYPEYPTKKQFIEYLESYARKFNINPRFNECVKFAKYD
ESCKLWKVKTISPNGSEVEYICQWLVVATGENAEKVVPNIEGLKEFGGEVIHACDYKCGE
KFFGKKVLVVGCGNSGMEVSLDLCNHNAQPSIVCRSSVHVLPREIFGTSTFELAMFMMKW
LPLWLVDKIILILTWFILGNIEKYGLKRPSIGPLELKNTQGKTPVLDIGALEKIRSRKIN
VVPGIKKFSCGTVELVNGEKLEIDSVVLATGYCSNVPYWLQESEFFSNNGFPKAPFPNSW
KGKSGLYAVGFTRRGLAGASADAIRIAQDIGKVYKQDLKQTKQKFPTHRGCISTS

Transcript Sequence

Gene sequence data has not been registered.